Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911623.1_cds_XP_016461636.1_54938
CDS Infomation

[gene=LOC107784948] [db_xref=GeneID:107784948] [protein=flowering locus K homology domain-like] [protein_id=XP_016461636.1] [location=join(15607..16107,18367..18616,21592..21740,21823..22101,22399..22593,23726..23908)] [gbkey=CDS]
Sequence

ATGGCTGATGAAAGTTGTCAGGAATATGACCTTGGTAATGTGTACGACGCAGACAATGTG
CATGGGGCAGAGGATGCACATAACATGGATAATATTCAAGAAACGGACAATGCGCATGAG
AGCAGCTTGCCTTTAGAAGAGGTACAAGTTGAGTCCCTTCAGGGACATGAGATAAAATTG
GAACCAGAAGAGGTACAAATTGCGTCCCTTGGGGGAGATCCGATAAAATTAGAGGCAGAA
GAGGTACAAGATGCGTCCCTTCAGGGACATCCAATAAAATTGGAATCAGAAGAGGTAAAA
GTTGCTGAAAACGGTTCAGGAGGTGGTGAGGAAAAAAGATGGCCTGGTTGGCCTGGAGAA
AATGTCTTCAGAATGTTAGTTCCTTCCAAGAAGGTTGGTGGCATCATTGGCCGCAAAGGA
GAGTATATAAAAAAAACTTGCGAAGAAACAAAAGCTCGCATTAAGATCCTTGATGGTCTT
CCTGGGTCTACAGAAAGAGCTGTGATGATATCTGCAAAGGAAGAGCCTAGCCTCTCTATT
CCACCTGCTATGGATGGCCTTTTGAAGGTCCATAAGCGGATTATAGATGTGGATCATGAC
TCCACCAATACTCCTTCTGGTTCTGGGAAACCGGTTTCTACTAGACTACTTGTGGCTGCT
ACACAGGCTGCTATCTTGATTGGAAAGCAGGGTGCAACCGTTAAGTCTATTCAAGACGAA
TCTCATTGCACTATTCGAATTCTTGGAGGAGAGCATCTCCCCATTTTTGCCCTGCCTGAT
GATAGTATCGTTGAGATACAAGGGGAGCCAGCAGGCGTGCATAAAGCAGTTGAAATGATT
GCAACTCATCTGAGGAAATTTTTAGTTGATCGCAGTGTAATTGGAGTATTTGAGAAACTT
ATGCAAATGCCAAATGCTCGTGCACACCAGAATATGCCCCCGCCTGGGCCTACTGAACCT
TGGGGTCCACCTCCATCCAGTTTTCCCATGAGTGCTGGGGGACCTGGATTTGGAGCCAAC
CCCCAGTATATGCCGCCTCCACGGCAATTTGACAATTATTTTCCACGAGTGGACAGGCCT
CTAGATATGCAACCTCATCCCGGCCCCCCTGTTTACGGCAGAGATGCTTCAGTGGGATCT
CATGCAAATGTGCAACCACAACAATCCATAGTTTCAAAGGTCACACAAAACATCCAAATT
CCTTTATCATATGCTGATGCCGTTATTGGGGCTTCTGGTTCCAATATTAGTTATATTCGT
CGGACAAGTGGTGCAACTATTGCAGTGCAGGAAACAAGGGGTGTTCCTGGTGAGATGACT
GTTGAGATAAATGGTTCTGCATCACAAGTCCAAACAGCACAGCAATTAATTCAGAATTCC
ATCGCCGACGCTACCAACTCAATGCAGAATGCTGCTGCTGGACCACCTTCCCAAGGTTAT
AATCCTTATCCTTCTCAGGTTCCTGTGTACCCTTCACAGTCTAGTGCCACTGGTCATGCT
GGCCAGGCTCCAGCTGCAGATTATGGTTCTGTTTATGGAGGCAGCTACGGTTATTAA

Peptide Sequence

PEP ID

XP_016461636.1
PEP Infomation

PREDICTED: flowering locus K homology domain-like [Nicotiana tabacum]
Sequence

MADESCQEYDLGNVYDADNVHGAEDAHNMDNIQETDNAHESSLPLEEVQVESLQGHEIKL
EPEEVQIASLGGDPIKLEAEEVQDASLQGHPIKLESEEVKVAENGSGGGEEKRWPGWPGE
NVFRMLVPSKKVGGIIGRKGEYIKKTCEETKARIKILDGLPGSTERAVMISAKEEPSLSI
PPAMDGLLKVHKRIIDVDHDSTNTPSGSGKPVSTRLLVAATQAAILIGKQGATVKSIQDE
SHCTIRILGGEHLPIFALPDDSIVEIQGEPAGVHKAVEMIATHLRKFLVDRSVIGVFEKL
MQMPNARAHQNMPPPGPTEPWGPPPSSFPMSAGGPGFGANPQYMPPPRQFDNYFPRVDRP
LDMQPHPGPPVYGRDASVGSHANVQPQQSIVSKVTQNIQIPLSYADAVIGASGSNISYIR
RTSGATIAVQETRGVPGEMTVEINGSASQVQTAQQLIQNSIADATNSMQNAAAGPPSQGY
NPYPSQVPVYPSQSSATGHAGQAPAADYGSVYGGSYGY

Transcript Sequence

Gene sequence data has not been registered.